C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WW domain containing adaptor with coiled-coil
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170854 Wac-015 ENSMUSG00000024283 10090 + 18:7905475-7916291 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000170854
Transcript ID Liver
ENSMUST00000170854 11.312±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00077T CIL_00077T_0003 CGP 18:7347962-7973547
CIL_0008UK CIL_0008UK_0002 VISTA 18:7743683-8345852

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005681 IDA spliceosomal complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000345541 WAC-003 retained_intron Homo_sapiens 0 968
ENST00000347934 WAC-006 protein_coding Homo_sapiens 0 316
ENST00000354911 WAC-017 protein_coding Homo_sapiens 0 968
ENST00000375646 WAC-001 protein_coding Homo_sapiens 0 316
ENST00000375664 WAC-016 protein_coding Homo_sapiens 0 968
ENST00000414108 WAC-012 protein_coding Homo_sapiens 0 616
ENST00000420266 WAC-004 protein_coding Homo_sapiens 0 468
ENST00000424454 WAC-005 nonsense_mediated_decay Homo_sapiens 0 968
ENST00000428935 WAC-201 protein_coding Homo_sapiens 0 968
ENST00000439676 WAC-018 nonsense_mediated_decay Homo_sapiens 0 968
ENST00000442148 WAC-010 protein_coding Homo_sapiens 0 307
ENST00000472862 WAC-019 retained_intron Homo_sapiens 0 230
ENST00000476046 WAC-013 retained_intron Homo_sapiens 0 403
ENST00000495268 WAC-020 retained_intron Homo_sapiens 2e-27 126

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