C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin D-type binding-protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171260 Ccndbp1-201 ENSMUSG00000023572 10090 + 2:121008472-121016513 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverLungOvaryPlacentaENSMUST00000171260
Transcript ID Adipose Adrenal Brain Breast Colon Liver Lung Ovary Placenta
ENSMUST00000171260 2.838±0.05 3.870±0.00 10.050±0.00 2.451±0.00 3.115±1.41 1.517±0.00 2.535±0.00 2.124±0.63 3.619±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YC CIL_0005YC_0002 CGP 2:120977017-121016904

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 ISO nucleus
GO:0005737 IEA cytoplasm
GO:0007049 IEA cell cycle
GO:0051726 IEA regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300213 CCNDBP1-001 protein_coding Homo_sapiens 0 878
ENST00000444658 CCNDBP1-017 retained_intron Homo_sapiens 0 706
ENST00000562553 CCNDBP1-014 nonsense_mediated_decay Homo_sapiens 0 462
ENST00000563065 CCNDBP1-003 nonsense_mediated_decay Homo_sapiens 0 669
ENST00000564630 CCNDBP1-005 retained_intron Homo_sapiens 0 708
ENST00000565296 CCNDBP1-010 nonsense_mediated_decay Homo_sapiens 0 878
ENST00000566515 CCNDBP1-009 nonsense_mediated_decay Homo_sapiens 0 878
ENST00000566882 CCNDBP1-007 retained_intron Homo_sapiens 0 621
ENST00000567434 CCNDBP1-013 nonsense_mediated_decay Homo_sapiens 0 462
ENST00000567690 CCNDBP1-015 retained_intron Homo_sapiens 0 527
ENST00000568507 CCNDBP1-006 nonsense_mediated_decay Homo_sapiens 0 527
ENST00000568936 CCNDBP1-008 retained_intron Homo_sapiens 0 527
ENST00000569745 CCNDBP1-002 nonsense_mediated_decay Homo_sapiens 0 671

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