C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tocopherol (alpha) transfer protein-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171696 Ttpal-201 ENSMUSG00000017679 10090 + 2:163602314-163619012 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000171696
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000171696 4.121±1.29 3.807±0.35 4.612±1.10 6.760±0.50 4.555±2.07 2.878±1.07 2.117±0.11 2.323±0.46 1.763±0.70 5.540±0.40 0.732±0.25 3.680±1.68 3.936±0.87 0.455±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R9 CIL_0007R9_0002 VISTA 2:163385776-163987192
CIL_0002B3 CIL_0002B3_0002 CGP 2:163506808-163619013
CIL_0002SO CIL_0002SO_0002 CGP 2:163602314-163645131

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005215 IEA transporter activity
GO:0005622 IEA intracellular
GO:0006810 IEA transport
GO:0008150 ND biological_process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262605 TTPAL-002 protein_coding Homo_sapiens 0 1319
ENST00000372904 TTPAL-001 protein_coding Homo_sapiens 0 1242
ENST00000372906 TTPAL-005 protein_coding Homo_sapiens 0 538
ENST00000456317 TTPAL-004 protein_coding Homo_sapiens 0 682

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