C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ras-like without CAAX 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172252 Rit1-007 ENSMUSG00000028057 10090 + 3:88716906-88729556 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastOvaryPlacentaTestisENSMUST00000172252
Transcript ID Brain Breast Ovary Placenta Testis
ENSMUST00000172252 10.345±0.00 11.757±0.00 18.332±1.25 13.967±2.67 9.529±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008P5 CIL_0008P5_0002 VISTA 3:88218217-88823366
CIL_000898 CIL_000898_0002 VISTA 3:88224783-88827970

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IDA GTP binding
GO:0005886 IDA plasma membrane
GO:0006184 IEA GTP catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368322 RIT1-002 protein_coding Homo_sapiens 0 656
ENST00000368323 RIT1-001 protein_coding Homo_sapiens 0 656
ENST00000461050 RIT1-003 nonsense_mediated_decay Homo_sapiens 0 610
ENST00000462687 RIT1-004 retained_intron Homo_sapiens 7e-17 92
ENST00000539040 RIT1-005 protein_coding Homo_sapiens 0 660
ENST00000609492 RIT1-006 protein_coding Homo_sapiens 0 460

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