C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein tyrosine phosphatase, receptor type, D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172811 Ptprd-019 ENSMUSG00000028399 10090 - 4:76099412-76107395 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OT CIL_0003OT_0002 CGP 4:75277354-78211961
CIL_0007VK CIL_0007VK_0002 VISTA 4:75400793-76001396
CIL_0007LL CIL_0007LL_0002 UCNEbase 4:75700943-76138737
CIL_0005UW CIL_0005UW_0003 CGP 4:75941238-80851719

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356435 PTPRD-202 protein_coding Homo_sapiens 0 553
ENST00000381196 PTPRD-002 protein_coding Homo_sapiens 0 553
ENST00000471274 PTPRD-005 processed_transcript Homo_sapiens 0 553
ENST00000540109 PTPRD-206 protein_coding Homo_sapiens 0 553

Loading