C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173931 Adamts10-002 ENSMUSG00000024299 10090 + 17:33524204-33553768 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000173931
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000173931 11.778±4.80 4.798±1.23 13.139±0.00 11.134±1.53 8.266±4.14 5.036±0.50 4.624±1.27 4.008±1.04 1.759±0.92 25.538±8.07 1.533±0.35 25.051±9.56 1.531±0.20 0.626±0.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004222 IEA metalloendopeptidase activity
GO:0006508 IEA proteolysis
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000113910 adamts10-001 protein_coding Danio_rerio 0 403
ENST00000270328 ADAMTS10-201 protein_coding Homo_sapiens 0 2143
ENST00000593913 ADAMTS10-005 nonsense_mediated_decay Homo_sapiens 0 2193
ENST00000595838 ADAMTS10-003 protein_coding Homo_sapiens 0 1700
ENST00000596466 ADAMTS10-010 processed_transcript Homo_sapiens 0 970
ENST00000596709 ADAMTS10-012 processed_transcript Homo_sapiens 0 983
ENST00000596851 ADAMTS10-002 nonsense_mediated_decay Homo_sapiens 0 1714
ENST00000597188 ADAMTS10-001 protein_coding Homo_sapiens 0 2143
ENST00000601163 ADAMTS10-008 retained_intron Homo_sapiens 0 1236
ENST00000601872 ADAMTS10-009 retained_intron Homo_sapiens 0 438

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