C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000174017  |
Smarcd2-008 |
ENSMUSG00000078619 |
10090 | - |
11:106266891-106267528  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0009B9 | CIL_0009B9_0002 | VISTA | 11:105834084-106435839 |
| CIL_0006QA | CIL_0006QA_0002 | CGP | 11:106256154-106272972 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000225742
|
SMARCD2-002 | protein_coding | Homo_sapiens | 0 | 327 |
|
ENST00000323347
|
SMARCD2-003 | protein_coding | Homo_sapiens | 0 | 339 |
|
ENST00000448276
|
SMARCD2-001 | protein_coding | Homo_sapiens | 0 | 333 |
|
ENST00000577686
|
SMARCD2-008 | retained_intron | Homo_sapiens | 0.00000000000003 | 82 |
|
ENST00000580054
|
SMARCD2-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 337 |
|
ENST00000584400
|
SMARCD2-006 | nonsense_mediated_decay | Homo_sapiens | 0.00000000000008 | 82 |
|
ENST00000613943
|
SMARCD2-201 | protein_coding | Homo_sapiens | 0 | 333 |
