Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	protein tyrosine phosphatase, receptor type, D
ENSMUST00000174023	Ptprd-016	ENSMUSG00000028399	10090	-	4:75944958-76325264	protein_coding

Expression Patterns

No expression data.

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0003OT	CIL_0003OT_0002	CGP	4:75277354-78211961
CIL_0007VK	CIL_0007VK_0002	VISTA	4:75400793-76001396
CIL_0007LL	CIL_0007LL_0002	UCNEbase	4:75700943-76138737
CIL_0005UW	CIL_0005UW_0003	CGP	4:75941238-80851719

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0004725	IEA	protein tyrosine phosphatase activity
GO:0035335	IEA	peptidyl-tyrosine dephosphorylation

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSDART00000082630	CABZ01084323.1-201	protein_coding	Danio_rerio	0	497
ENST00000355233	PTPRD-201	protein_coding	Homo_sapiens	0	6270
ENST00000356435	PTPRD-202	protein_coding	Homo_sapiens	0	3753
ENST00000381196	PTPRD-002	protein_coding	Homo_sapiens	0	3753
ENST00000397606	PTPRD-006	protein_coding	Homo_sapiens	0	3585
ENST00000397611	PTPRD-203	protein_coding	Homo_sapiens	0	6325
ENST00000397617	PTPRD-204	protein_coding	Homo_sapiens	0	3596
ENST00000463477	PTPRD-001	protein_coding	Homo_sapiens	0	736
ENST00000477552	PTPRD-007	retained_intron	Homo_sapiens	0	326
ENST00000481079	PTPRD-008	protein_coding	Homo_sapiens	0	370
ENST00000486161	PTPRD-003	protein_coding	Homo_sapiens	0	6283
ENST00000488774	PTPRD-004	processed_transcript	Homo_sapiens	0	484
ENST00000537002	PTPRD-205	protein_coding	Homo_sapiens	0	6165
ENST00000540109	PTPRD-206	protein_coding	Homo_sapiens	0	3753

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