C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribonuclease P 40 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174852 Rpp40-003 ENSMUSG00000021418 10090 - 13:35896712-35906328 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000174852
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000174852 0.355±0.11 0.333±0.00 0.311±0.03 0.254±0.06 0.429±0.13 0.250±0.08 0.120±0.01 0.226±0.05 0.146±0.01 0.197±0.05 0.529±0.22 0.343±0.20 0.199±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000162 CIL_000162_0003 CGP 13:35659862-35906359
CIL_0003SE CIL_0003SE_0002 CGP 13:35893472-35970388

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319533 RPP40-002 protein_coding Homo_sapiens 0 617
ENST00000380051 RPP40-001 protein_coding Homo_sapiens 0 617
ENST00000464646 RPP40-006 protein_coding Homo_sapiens 0 614
ENST00000618533 RPP40-201 protein_coding Homo_sapiens 0 490

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