C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: torsin family 2, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000175763 Tor2a-009 ENSMUSG00000009563 10090 + 2:32757260-32762244 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleOvaryPlacentaENSMUST00000175763
Transcript ID Brain Muscle Ovary Placenta
ENSMUST00000175763 1.966±0.00 1.286±0.00 11.782±1.16 9.398±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YA CIL_0008YA_0002 VISTA 2:32608279-33209524
CIL_00075N CIL_00075N_0002 CGP 2:32757026-32775633

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005788 IDA endoplasmic reticulum lumen
GO:0051085 IEA chaperone mediated protein folding requiring cofactor
GO:0051260 IDA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336067 TOR2A-005 protein_coding Homo_sapiens 0 261
ENST00000373281 TOR2A-002 protein_coding Homo_sapiens 0 261
ENST00000373284 TOR2A-006 protein_coding Homo_sapiens 0 573
ENST00000463256 TOR2A-008 nonsense_mediated_decay Homo_sapiens 0 261
ENST00000463577 TOR2A-004 protein_coding Homo_sapiens 0 261
ENST00000472723 TOR2A-003 retained_intron Homo_sapiens 0 361
ENST00000493439 TOR2A-009 protein_coding Homo_sapiens 7e-24 115
ENST00000494135 TOR2A-001 retained_intron Homo_sapiens 0 361
ENST00000496460 TOR2A-007 nonsense_mediated_decay Homo_sapiens 0 778

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