C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sine oculis-related homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176091 Six1-003 ENSMUSG00000051367 10090 - 12:73043531-73053887 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaENSMUST00000176091
Transcript ID Ovary Placenta
ENSMUST00000176091 0.144±0.05 0.166±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MW CIL_0008MW_0002 VISTA 12:72750612-73352572
CIL_00036B CIL_00036B_0003 CGP 12:72939892-73053887
CIL_0006SM CIL_0006SM_0003 CGP 12:73040015-73113456

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000247182 SIX1-001 protein_coding Homo_sapiens 0 440
ENST00000553535 SIX1-002 processed_transcript Homo_sapiens 0 440
ENST00000554986 SIX1-005 protein_coding Homo_sapiens 0 440
ENST00000555955 SIX1-004 retained_intron Homo_sapiens 0 440

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