C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Kv channel interacting protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176191 Kcnip4-005 ENSMUSG00000029088 10090 - 5:48389504-48754570 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000176191
Transcript ID Breast Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000176191 0.277±0.06 0.162±0.00 0.110±0.08 0.072±0.02 0.367±0.21 0.062±0.01 1.074±0.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ON CIL_0002ON_0002 CGP 5:48372392-49524904
CIL_00033U CIL_00033U_0003 CGP 5:48389502-50058996

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005244 IEA voltage-gated ion channel activity
GO:0005267 IEA potassium channel activity
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359001 KCNIP4-201 protein_coding Homo_sapiens 0 1328
ENST00000382148 KCNIP4-001 protein_coding Homo_sapiens 0 1328
ENST00000382149 KCNIP4-008 processed_transcript Homo_sapiens 0 909
ENST00000382150 KCNIP4-002 protein_coding Homo_sapiens 0 1020
ENST00000382152 KCNIP4-004 protein_coding Homo_sapiens 0 1022
ENST00000447367 KCNIP4-003 protein_coding Homo_sapiens 0 1020
ENST00000509207 KCNIP4-009 protein_coding Homo_sapiens 0 989
ENST00000515786 KCNIP4-006 nonsense_mediated_decay Homo_sapiens 0 828

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