C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 2, H2bb
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000177113 Hist2h2bb-001 ENSMUSG00000050936 10090 + 3:96269752-96270132 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENSMUST00000177113
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000177113 1.221±0.41 1.606±0.00 0.274±0.17 5.488±0.07 0.686±0.01 6.900±1.12 0.397±0.35 0.581±0.13 10.646±6.45 4.833±2.38 7.196±5.31 1.017±0.12

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005654 TAS nucleoplasm
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000156838 ano9a-001 protein_coding Danio_rerio 0 346
ENSDART00000129255 ano9a-201 protein_coding Danio_rerio 0 342
ENSDART00000156508 zgc:173587-001 protein_coding Danio_rerio 0 340
ENSDART00000115210 ano9a-001 protein_coding Danio_rerio 0 340
ENSDART00000114598 ano9a-001 protein_coding Danio_rerio 0 340
ENSDART00000126590 zgc:173587-201 protein_coding Danio_rerio 0 337
ENSDART00000130784 zgc:173587-202 protein_coding Danio_rerio 0 337
ENSDART00000073457 zgc:194989-001 protein_coding Danio_rerio 0 327
ENSDART00000152735 zgc:171759-001 protein_coding Danio_rerio 0 326
ENSDART00000154655 zgc:171759-001 protein_coding Danio_rerio 0 318
ENSDART00000157137 si:dkey-261m9.19-001 protein_coding Danio_rerio 0 318
ENSDART00000102959 si:dkey-261m9.19-201 protein_coding Danio_rerio 0 316
ENSDART00000114767 CABZ01086354.1-201 protein_coding Danio_rerio 0 315
ENSDART00000113626 zgc:171759-205 protein_coding Danio_rerio 0 315
ENSDART00000146289 zgc:171759-208 protein_coding Danio_rerio 0 315
ENSDART00000109751 protein_coding Danio_rerio 0 307
ENSDART00000152761 zgc:171759-001 protein_coding Danio_rerio 0 305
ENSDART00000123848 wu:fe11b02-205 protein_coding Danio_rerio 0 303
ENSDART00000146977 zgc:171759-209 protein_coding Danio_rerio 0 302
ENSDART00000136970 zgc:171759-210 protein_coding Danio_rerio 0 302
ENSDART00000155850 zgc:171759-001 protein_coding Danio_rerio 0 300
ENSDART00000050237 zgc:171759-201 protein_coding Danio_rerio 0 298
ENSDART00000114327 wu:fe11b02-201 protein_coding Danio_rerio 0 296
ENSDART00000126724 wu:fe11b02-206 protein_coding Danio_rerio 0 285
ENSDART00000122306 wu:fe11b02-204 protein_coding Danio_rerio 0 285
ENST00000289316 HIST1H2BD-001 protein_coding Homo_sapiens 0 457
ENST00000314332 HIST1H2BC-003 protein_coding Homo_sapiens 0 462
ENST00000339812 HIST1H2BJ-003 protein_coding Homo_sapiens 0 440
ENST00000356530 HIST1H2BF-001 protein_coding Homo_sapiens 0 440
ENST00000356950 HIST1H2BK-001 protein_coding Homo_sapiens 0 473
ENST00000369167 HIST2H2BF-001 protein_coding Homo_sapiens 0 462
ENST00000369385 HIST2H2BD-001 processed_pseudogene Homo_sapiens 0 394
ENST00000377401 HIST1H2BL-001 protein_coding Homo_sapiens 0 462
ENST00000377733 HIST1H2BI-001 protein_coding Homo_sapiens 0 446
ENST00000377777 HIST1H2BD-002 protein_coding Homo_sapiens 0 457
ENST00000396980 HIST1H2BN-201 protein_coding Homo_sapiens 0 425
ENST00000396984 HIST1H2BC-002 protein_coding Homo_sapiens 0 462
ENST00000412169 HIST2H2BA-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 424
ENST00000419683 HIST1H2BPS3-001 processed_pseudogene Homo_sapiens 0 204
ENST00000430394 HIST2H2BA-002 processed_transcript Homo_sapiens 0 420
ENST00000449108 HIST2H2BB-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 440
ENST00000449538 HIST1H2BN-002 nonsense_mediated_decay Homo_sapiens 0 433
ENST00000464664 CH507-42P11.1-001 processed_pseudogene Homo_sapiens 0 466
ENST00000465850 RP11-274J15.2-001 processed_pseudogene Homo_sapiens 0 327
ENST00000469483 HIST2H2BF-002 processed_transcript Homo_sapiens 0 459
ENST00000498492 HIST2H2BC-001 processed_pseudogene Homo_sapiens 0 396
ENST00000545683 HIST2H2BF-201 protein_coding Homo_sapiens 0 462
ENST00000599962 H2BFS-001 protein_coding Homo_sapiens 0 468
ENST00000606613 HIST1H2BN-003 protein_coding Homo_sapiens 0 427
ENST00000607124 HIST1H2BJ-001 protein_coding Homo_sapiens 0 440
ENST00000609585 HIST2H2BB-002 processed_transcript Homo_sapiens 0 440
ENST00000612898 HIST1H2BN-001 protein_coding Homo_sapiens 0 433
ENST00000614097 HIST1H2BE-001 protein_coding Homo_sapiens 0 446
ENST00000616182 HIST1H2BO-001 protein_coding Homo_sapiens 0 433
ENST00000619466 HIST1H2BH-001 protein_coding Homo_sapiens 0 436
ENST00000621112 HIST1H2BM-001 protein_coding Homo_sapiens 0 383

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