C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prospero homeobox 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000177289 Prox2-002 ENSMUSG00000042320 10090 - 12:85086385-85097081 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000177289
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000177289 0.549±0.05 0.430±0.25 0.821±0.01 0.995±0.00 0.601±0.28 0.394±0.05 0.213±0.06 0.357±0.18 0.291±0.09 0.791±0.00 0.315±0.11 0.693±0.21 0.259±0.04 3.634±2.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003U2 CIL_0003U2_0002 CGP 12:84996321-85106431
CIL_0004KC CIL_0004KC_0003 CGP 12:85086385-85134091

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000554107 YLPM1-010 protein_coding Homo_sapiens 0 200
ENST00000556084 PROX2-001 protein_coding Homo_sapiens 0 350
ENST00000556489 PROX2-201 protein_coding Homo_sapiens 0 684

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