C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chaperonin containing Tcp1, subunit 8 (theta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000177376 Cct8-002 ENSMUSG00000025613 10090 - 16:87483988-87495788 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartLiverMuscleOvaryPlacentaTestisENSMUST00000177376
Transcript ID Bladder Brain Breast Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000177376 32.029±1.94 29.753±4.41 13.139±6.83 10.041±3.17 58.164±17.92 24.278±2.93 53.376±1.86 66.860±32.05 43.365±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003CH CIL_0003CH_0002 CGP 16:87433407-87483517
CIL_000313 CIL_000313_0002 CGP 16:87454703-87495873
CIL_0000MN CIL_0000MN_0003 CGP 16:87483326-87595336

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002199 IDA zona pellucida receptor complex
GO:0005524 IEA ATP binding
GO:0005832 IDA chaperonin-containing T-complex
GO:0007339 IDA binding of sperm to zona pellucida
GO:0044267 IEA cellular protein metabolic process
GO:0044297 IDA cell body
GO:0046931 IMP pore complex assembly
GO:1901998 IMP toxin transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000286788 CCT8-003 protein_coding Homo_sapiens 0 1712
ENST00000413611 CCT8P1-001 processed_pseudogene Homo_sapiens 0 1522
ENST00000431234 CCT8-006 protein_coding Homo_sapiens 0 453
ENST00000432178 CCT8-001 protein_coding Homo_sapiens 0 401
ENST00000470450 CCT8-004 processed_transcript Homo_sapiens 0 1712
ENST00000475205 CCT8-011 retained_intron Homo_sapiens 0 309
ENST00000480359 CCT8-010 processed_transcript Homo_sapiens 0 361
ENST00000481059 CCT8-007 processed_transcript Homo_sapiens 0 475
ENST00000484403 CCT8-008 retained_intron Homo_sapiens 0 370
ENST00000496121 CCT8-005 retained_intron Homo_sapiens 0 732
ENST00000540844 CCT8-201 protein_coding Homo_sapiens 0 1903

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