C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HECT domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000177381 Hectd2-008 ENSMUSG00000041180 10090 + 19:36585489-36618844 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLungOvaryPlacentaTestisENSMUST00000177381
Transcript ID Brain Kidney Lung Ovary Placenta Testis
ENSMUST00000177381 2.704±0.00 0.198±0.00 0.255±0.00 0.491±0.13 0.279±0.12 2.580±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00018O CIL_00018O_0002 CGP 19:36379067-36621135
CIL_0008L8 CIL_0008L8_0002 VISTA 19:36386377-36989836
CIL_00018N CIL_00018N_0002 CGP 19:36554639-36736653

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IBA ubiquitin-protein transferase activity
GO:0005634 IBA nucleus
GO:0005737 IBA cytoplasm
GO:0042787 IBA protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298068 HECTD2-005 protein_coding Homo_sapiens 0 1526
ENST00000371667 HECTD2-003 protein_coding Homo_sapiens 0 1526
ENST00000446394 HECTD2-201 protein_coding Homo_sapiens 0 1526

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