C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: OTU domain containing 7A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000177534 Otud7a-002 ENSMUSG00000033510 10090 + 7:63650815-63757989 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000177534
Transcript ID Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000177534 11.032±13.32 0.029±0.02 0.079±0.02 0.058±0.02 0.035±0.01 0.006±0.00 0.025±0.01 0.085±0.00 0.026±0.00 1.674±0.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ON CIL_0006ON_0002 CGP 7:63444751-63938915

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000156751 OTUD7A-001 protein_coding Danio_rerio 0 1236
ENSDART00000012677 OTUD7A-201 protein_coding Danio_rerio 0 953
ENST00000307050 OTUD7A-001 protein_coding Homo_sapiens 0 2494
ENST00000417191 OTUD7B-003 protein_coding Homo_sapiens 0 527
ENST00000558371 OTUD7A-003 retained_intron Homo_sapiens 0 728
ENST00000560536 OTUD7A-002 nonsense_mediated_decay Homo_sapiens 0 494
ENST00000560598 OTUD7A-004 protein_coding Homo_sapiens 0 448
ENST00000562954 ARHGAP11B-008 processed_transcript Homo_sapiens 0 235
ENST00000581312 OTUD7B-001 protein_coding Homo_sapiens 0 590
ENST00000602616 ARHGAP11B-007 processed_transcript Homo_sapiens 0 235

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