C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178310 Fau-202 ENSMUSG00000038274 10090 + 19:6057888-6059524 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000178310
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000178310 26.611±5.40 56.910±8.11 131.949±42.61 45.355±10.81 56.003±30.10 91.183±10.52 16.088±4.62 48.747±4.48 48.088±20.28 33.092±0.00 21.492±4.65 51.961±13.17 61.742±17.32 39.865±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0002 VISTA 19:5510095-6112698
CIL_0001YU CIL_0001YU_0002 CGP 19:6053630-6059524

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000474180 FAUP1-001 processed_pseudogene Homo_sapiens 0 460

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