C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6223
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178436 Gm6223-001 ENSMUSG00000096647 10090 + 9:90118937-90119807 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000178436
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000178436 0.145±0.07 0.944±0.58 0.054±0.02 0.191±0.08 0.589±0.50 0.395±0.23 0.279±0.03 0.249±0.13 0.491±0.47 0.166±0.04 0.057±0.01 0.697±0.44 0.040±0.02 0.567±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085Y CIL_00085Y_0002 VISTA 9:90013787-90616367

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000299596 TMEM41B-003 nonsense_mediated_decay Homo_sapiens 0 1027
ENST00000524543 TMEM41B-002 nonsense_mediated_decay Homo_sapiens 0 1000
ENST00000527813 TMEM41B-005 protein_coding Homo_sapiens 0 630
ENST00000528080 TMEM41B-001 protein_coding Homo_sapiens 0 1027
ENST00000533723 TMEM41B-004 protein_coding Homo_sapiens 0 375
ENST00000611268 TMEM41B-201 protein_coding Homo_sapiens 0 1027

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