C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermatogenesis associated 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178631 Spata18-204 ENSMUSG00000029155 10090 + 5:73651380-73679096 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000178631
Transcript ID Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000178631 0.276±0.00 0.055±0.00 0.110±0.00 0.069±0.01 0.021±0.00 0.032±0.00 4.666±0.00 0.016±0.00 62.760±14.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001CP CIL_0001CP_0002 CGP 5:73632749-73679484
CIL_0001CQ CIL_0001CQ_0002 CGP 5:73651380-74068430

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295213 SPATA18-001 protein_coding Homo_sapiens 0 715
ENST00000419395 SPATA18-002 protein_coding Homo_sapiens 0 715
ENST00000505320 SPATA18-004 nonsense_mediated_decay Homo_sapiens 0 669
ENST00000511028 SPATA18-003 retained_intron Homo_sapiens 0 669

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