C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5558
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178933 Gm5558-201 ENSMUSG00000096726 10090 - 5:91806576-91807073 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastKidneyLiverOvaryPlacentaENSMUST00000178933
Transcript ID Bladder Brain Breast Kidney Liver Ovary Placenta
ENSMUST00000178933 0.067±0.02 0.138±0.13 1.016±0.00 0.182±0.00 0.085±0.07 0.450±0.05 0.185±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SD CIL_0006SD_0002 CGP 5:91517615-91963068

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355968 PPIA-002 protein_coding Homo_sapiens 0 592
ENST00000358455 PPIAP22-001 processed_pseudogene Homo_sapiens 0 651
ENST00000377951 PPIAP26-001 processed_pseudogene Homo_sapiens 0 449
ENST00000395416 AC005522.6-001 processed_pseudogene Homo_sapiens 0 377
ENST00000403866 PPIAP9-001 processed_pseudogene Homo_sapiens 0 593
ENST00000405422 PPIAP31-001 processed_pseudogene Homo_sapiens 0 640
ENST00000411837 RP5-882O7.4-001 processed_pseudogene Homo_sapiens 0 549
ENST00000414143 PPIAP2-001 processed_pseudogene Homo_sapiens 0 577
ENST00000414949 PPIAP29-001 processed_pseudogene Homo_sapiens 0 612
ENST00000414951 RP11-5P22.1-001 processed_pseudogene Homo_sapiens 0 562
ENST00000415473 PPIAP30-001 processed_pseudogene Homo_sapiens 0 411
ENST00000415933 PPIA-007 nonsense_mediated_decay Homo_sapiens 0 468
ENST00000418291 PPIAP9-001 processed_pseudogene Homo_sapiens 0 593
ENST00000418508 AC019050.1-001 processed_pseudogene Homo_sapiens 0 573
ENST00000420099 PPIAP23-001 processed_pseudogene Homo_sapiens 0 545
ENST00000420177 PPIAP25-001 processed_pseudogene Homo_sapiens 0 475
ENST00000420447 PPIAP9-001 processed_pseudogene Homo_sapiens 0 588
ENST00000423991 RP11-804H8.5-001 processed_pseudogene Homo_sapiens 0 202
ENST00000424692 RP11-728C8.1-001 processed_pseudogene Homo_sapiens 0 481
ENST00000428093 AC017083.2-001 processed_pseudogene Homo_sapiens 0 538
ENST00000430535 RP11-316K19.3-001 processed_pseudogene Homo_sapiens 0 424
ENST00000433548 AC018463.5-001 processed_pseudogene Homo_sapiens 0 568
ENST00000434706 PPIAP13-001 processed_pseudogene Homo_sapiens 0 560
ENST00000438675 PPIAP10-001 processed_pseudogene Homo_sapiens 0 263
ENST00000440658 PPIAP9-001 processed_pseudogene Homo_sapiens 0 593
ENST00000440938 AC073465.3-001 processed_pseudogene Homo_sapiens 0 556
ENST00000441480 RP11-214N16.2-001 processed_pseudogene Homo_sapiens 0 514
ENST00000441944 PPIAP33-001 processed_pseudogene Homo_sapiens 0 588
ENST00000442288 PPIAP9-001 processed_pseudogene Homo_sapiens 0 593
ENST00000443254 PPIAP9-001 processed_pseudogene Homo_sapiens 0 593
ENST00000443635 PPIAP9-001 processed_pseudogene Homo_sapiens 0 582
ENST00000446082 RP3-347M6.1-001 processed_pseudogene Homo_sapiens 0 492
ENST00000447284 RP11-312J18.3-001 processed_pseudogene Homo_sapiens 0 466
ENST00000447554 PPIAP9-001 processed_pseudogene Homo_sapiens 0 593
ENST00000448832 PPIAP1-001 processed_pseudogene Homo_sapiens 0 486
ENST00000448870 AC090804.1-001 processed_pseudogene Homo_sapiens 0 628
ENST00000450588 PPIAP3-001 processed_pseudogene Homo_sapiens 0 586
ENST00000451562 PPIA-006 protein_coding Homo_sapiens 0 462
ENST00000452091 AC005517.3-001 processed_pseudogene Homo_sapiens 0 470
ENST00000452411 AC091654.7-001 processed_pseudogene Homo_sapiens 0 590
ENST00000453800 PPIAP27-001 processed_pseudogene Homo_sapiens 3e-32 141
ENST00000455837 RP11-269M20.1-001 processed_pseudogene Homo_sapiens 0 464
ENST00000462517 PPIAP16-001 processed_pseudogene Homo_sapiens 0 457
ENST00000462678 RP4-545C24.5-001 processed_pseudogene Homo_sapiens 0 431
ENST00000464473 PPIAP21-001 processed_pseudogene Homo_sapiens 0 549
ENST00000467407 CYP11A1-005 processed_transcript Homo_sapiens 0 276
ENST00000468812 PPIA-001 protein_coding Homo_sapiens 0 651
ENST00000469748 RP11-440K22.1-001 processed_pseudogene Homo_sapiens 0 514
ENST00000480603 PPIA-008 processed_transcript Homo_sapiens 0 405
ENST00000481437 PPIA-005 retained_intron Homo_sapiens 0 231
ENST00000482002 AC005017.2-001 processed_pseudogene Homo_sapiens 0 525
ENST00000487348 RP11-415K20.1-001 processed_pseudogene Homo_sapiens 0 501
ENST00000487390 RP11-651P23.2-001 processed_pseudogene Homo_sapiens 0 398
ENST00000489459 PPIA-003 protein_coding Homo_sapiens 0 588
ENST00000494484 PPIA-004 retained_intron Homo_sapiens 0 427
ENST00000510729 PPIAP11-001 processed_pseudogene Homo_sapiens 0 612
ENST00000519658 CTD-3107M8.2-001 processed_pseudogene Homo_sapiens 0 429
ENST00000520812 RP11-114M5.3-001 processed_pseudogene Homo_sapiens 0 470
ENST00000527147 AP000620.1-001 processed_pseudogene Homo_sapiens 0 588
ENST00000530952 AP000662.9-001 processed_pseudogene Homo_sapiens 0 580
ENST00000550612 RP11-77I22.4-001 processed_pseudogene Homo_sapiens 0 309
ENST00000557078 PPIAP6-001 processed_pseudogene Homo_sapiens 0 558
ENST00000557282 RP11-481K9.4-001 processed_pseudogene Homo_sapiens 0 544
ENST00000562009 CTD-2311M21.2-002 processed_transcript Homo_sapiens 0 616
ENST00000563335 AC009120.8-001 processed_pseudogene Homo_sapiens 0 507
ENST00000564109 CTD-2311M21.2-003 processed_transcript Homo_sapiens 0 411
ENST00000564851 RP11-439I14.1-001 transcribed_processed_pseudogene Homo_sapiens 0 327
ENST00000567149 RP11-391L3.5-001 processed_pseudogene Homo_sapiens 0 538
ENST00000567559 RP11-281J9.1-001 processed_pseudogene Homo_sapiens 0 510
ENST00000567565 RP11-24M17.3-001 processed_pseudogene Homo_sapiens 0 599
ENST00000569235 CTD-2311M21.2-001 transcribed_processed_pseudogene Homo_sapiens 0 610
ENST00000577627 PPIAP14-001 processed_pseudogene Homo_sapiens 0 446
ENST00000583752 CTD-2267D19.4-001 processed_pseudogene Homo_sapiens 0 540
ENST00000585753 CTC-448F2.3-001 processed_pseudogene Homo_sapiens 0 529
ENST00000596021 CTB-147C22.3-001 processed_pseudogene Homo_sapiens 0 556
ENST00000606284 CTD-2501B8.5-001 processed_pseudogene Homo_sapiens 0 584
ENST00000620047 PPIA-201 protein_coding Homo_sapiens 0 556

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