C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6900
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178971 Gm6900-001 ENSMUSG00000093826 10090 - 7:10656479-10656820 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverOvaryPlacentaTestisENSMUST00000178971
Transcript ID Bladder Brain Liver Ovary Placenta Testis
ENSMUST00000178971 0.087±0.00 0.195±0.00 0.168±0.11 0.297±0.04 0.647±0.82 0.277±0.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310837 EIF1-003 processed_transcript Homo_sapiens 0 219
ENST00000421436 EIF1P1-001 processed_pseudogene Homo_sapiens 0 420
ENST00000423841 EIF1P3-001 processed_pseudogene Homo_sapiens 0 483
ENST00000428233 EIF1P2-001 processed_pseudogene Homo_sapiens 0 291
ENST00000462917 EIF1-002 retained_intron Homo_sapiens 0 298
ENST00000469257 EIF1-001 protein_coding Homo_sapiens 0 560
ENST00000469308 EIF1-005 processed_transcript Homo_sapiens 0 507
ENST00000482111 EIF1-004 retained_intron Homo_sapiens 0 350
ENST00000487533 EIF1P7-001 processed_pseudogene Homo_sapiens 0 449
ENST00000572664 EIF1P4-001 processed_pseudogene Homo_sapiens 0 363
ENST00000585002 EIF1P5-001 unprocessed_pseudogene Homo_sapiens 6e-29 130
ENST00000586699 EIF1-009 protein_coding Homo_sapiens 0 211
ENST00000591776 EIF1-010 protein_coding Homo_sapiens 0 558
ENST00000600054 EIF1P6-001 unprocessed_pseudogene Homo_sapiens 0 377

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