C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 10349
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000179225 Gm10349-201 ENSMUSG00000094111 10090 - 18:10483083-10483466 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartLiverPlacentaENSMUST00000179225
Transcript ID Bladder Brain Heart Liver Placenta
ENSMUST00000179225 1.416±0.00 1.899±0.00 0.138±0.00 2.951±0.75 0.023±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005O1 CIL_0005O1_0002 CGP 18:10064401-10562934
CIL_0005NU CIL_0005NU_0002 CGP 18:10325177-10610352
CIL_00084R CIL_00084R_0002 VISTA 18:10435381-11036621

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000219169 NUTF2-001 protein_coding Homo_sapiens 0 582
ENST00000448540 NUTF2P3-001 processed_pseudogene Homo_sapiens 0 427
ENST00000453086 NUTF2P7-001 processed_pseudogene Homo_sapiens 0 492
ENST00000551207 NUTF2P2-001 processed_pseudogene Homo_sapiens 0 527
ENST00000560892 NUTF2P6-001 processed_pseudogene Homo_sapiens 0 422
ENST00000567105 NUTF2-002 protein_coding Homo_sapiens 0 481
ENST00000568233 NUTF2-007 retained_intron Homo_sapiens 0 407
ENST00000568390 NUTF2-006 retained_intron Homo_sapiens 0 255
ENST00000568396 NUTF2-004 protein_coding Homo_sapiens 0 582
ENST00000569436 NUTF2-003 protein_coding Homo_sapiens 0 582
ENST00000570026 NUTF2-005 retained_intron Homo_sapiens 0 255
ENST00000587481 NUTF2-012 retained_intron Homo_sapiens 6.02558e-44 183
ENST00000604593 NUTF2P8-001 processed_pseudogene Homo_sapiens 0 307

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