C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory (inhibitor) subunit 2, pseudogene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000179333 Ppp1r2-ps6-001 ENSMUSG00000095869 10090 + 17:6253903-6254523 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverPlacentaTestisENSMUST00000179333
Transcript ID Bladder Brain Liver Placenta Testis
ENSMUST00000179333 0.452±0.00 0.159±0.00 0.065±0.02 0.010±0.00 1.313±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002QL CIL_0002QL_0003 CGP 17:6106437-6305783

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393023 PPP1R2P10-001 processed_pseudogene Homo_sapiens 0 442
ENST00000409879 KIAA0226L-012 protein_coding Homo_sapiens 0 440
ENST00000418939 PPP1R2-005 nonsense_mediated_decay Homo_sapiens 0 274
ENST00000424051 PPP1R2P4-001 processed_pseudogene Homo_sapiens 0 438
ENST00000438848 PPP1R2-003 protein_coding Homo_sapiens 0 353
ENST00000457256 PPP1R2P5-001 processed_pseudogene Homo_sapiens 0 438
ENST00000460437 PPP1R2-006 retained_intron Homo_sapiens 0 278
ENST00000478565 PPP1R2P6-001 processed_pseudogene Homo_sapiens 0 375
ENST00000522232 PPP1R2P3-001 processed_pseudogene Homo_sapiens 0 573
ENST00000618156 PPP1R2-001 protein_coding Homo_sapiens 0 616

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