C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 3436
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000179930 Gm3436-201 ENSMUSG00000096160 10090 + 9:70852576-70853418 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000179930
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000179930 0.162±0.07 0.140±0.07 0.082±0.00 0.010±0.00 0.089±0.03 0.125±0.03 0.062±0.02 0.167±0.12 0.053±0.00 0.104±0.06 0.453±0.36 0.072±0.02 0.226±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MN CIL_0008MN_0002 VISTA 9:70534536-71135234
CIL_0004P1 CIL_0004P1_0002 CGP 9:70678997-70934808

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323013 RRP7A-001 protein_coding Homo_sapiens 0 732
ENST00000357802 RRP7B-001 processed_transcript Homo_sapiens 0 606
ENST00000437211 RRP7B-003 processed_transcript Homo_sapiens 0 606
ENST00000458605 RRP7B-002 processed_transcript Homo_sapiens 0 606
ENST00000566851 RRP7B-005 transcribed_unprocessed_pseudogene Homo_sapiens 0 606

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