C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 4823
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000181990 Gm4823-001 ENSMUSG00000098177 10090 - 15:3745892-3746875 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyLiverLungPlacentaTestisENSMUST00000181990
Transcript ID Breast Kidney Liver Lung Placenta Testis
ENSMUST00000181990 0.086±0.00 0.060±0.03 0.006±0.00 0.053±0.00 0.011±0.00 1.982±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003B8 CIL_0003B8_0002 CGP 15:3317760-3979573

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 289
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 922
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 684
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 902
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 922
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 922
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 780
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 597
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 204
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 429
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 610
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 817
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 728
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 481
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 442
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 627
ENST00000433910 GAPDHP75-001 processed_pseudogene Homo_sapiens 0 379
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 652
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 459
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 335
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 586
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 874
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 490
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 684
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 684
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 638
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 654
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 741
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 477
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 300
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 708
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 804

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