C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding protein gene with multiple splicing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182184 Rbpms-005 ENSMUSG00000031586 10090 - 8:33784066-33853673 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverMusclePlacentaTestisENSMUST00000182184
Transcript ID Breast Liver Muscle Placenta Testis
ENSMUST00000182184 16.983±0.00 10.703±2.00 3.277±0.29 20.427±0.00 7.231±1.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008IH CIL_0008IH_0002 VISTA 8:33603821-34207069
CIL_0008D0 CIL_0008D0_0002 VISTA 8:33748285-34351942

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000287771 RBPMS-004 protein_coding Homo_sapiens 0 468
ENST00000320203 RBPMS-002 protein_coding Homo_sapiens 0 562
ENST00000339877 RBPMS-003 protein_coding Homo_sapiens 0 468
ENST00000397323 RBPMS-001 protein_coding Homo_sapiens 0 822
ENST00000517860 RBPMS-007 protein_coding Homo_sapiens 0 468
ENST00000519359 RBPMS-020 nonsense_mediated_decay Homo_sapiens 0 496
ENST00000519647 RBPMS-017 protein_coding Homo_sapiens 0 468
ENST00000519657 RBPMS-010 processed_transcript Homo_sapiens 0 361
ENST00000520161 RBPMS-015 protein_coding Homo_sapiens 0 468
ENST00000520191 RBPMS-006 protein_coding Homo_sapiens 0 468
ENST00000520916 RBPMS-005 processed_transcript Homo_sapiens 0 270
ENST00000520971 RBPMS-009 processed_transcript Homo_sapiens 0 270
ENST00000521370 RBPMS-011 processed_transcript Homo_sapiens 0 359
ENST00000522694 RBPMS-014 nonsense_mediated_decay Homo_sapiens 0 468
ENST00000523104 RBPMS-012 processed_transcript Homo_sapiens 0 357
ENST00000523115 RBPMS-016 protein_coding Homo_sapiens 0 368
ENST00000523717 RBPMS-019 processed_transcript Homo_sapiens 0 464

Loading