C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleoporin 153
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182914 Nup153-006 ENSMUSG00000021374 10090 - 13:46682845-46684014 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000182914
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000182914 17.949±5.22 17.290±0.00 24.904±5.55 16.307±2.57 7.764±1.14 10.322±2.07 6.387±0.63 23.546±5.50 35.998±5.91 72.939±2.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009C9 CIL_0009C9_0002 VISTA 13:46271320-46874349
CIL_0008JF CIL_0008JF_0002 VISTA 13:46271337-46874342
CIL_0008B7 CIL_0008B7_0002 VISTA 13:46332291-46935792
CIL_00081D CIL_00081D_0002 VISTA 13:46435395-47036634
CIL_00090E CIL_00090E_0002 VISTA 13:46584783-47186478
CIL_0003RM CIL_0003RM_0002 CGP 13:46669522-46727940
CIL_0003RN CIL_0003RN_0002 CGP 13:46679905-46929718

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262077 NUP153-001 protein_coding Homo_sapiens 0 403
ENST00000537253 NUP153-201 protein_coding Homo_sapiens 0 403
ENST00000613258 NUP153-202 protein_coding Homo_sapiens 0 403

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