C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S12-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183090 Rps12l1-001 ENSMUSG00000078087 10090 + 7:56014016-56014414 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverENSMUST00000183090
Transcript ID Brain Liver
ENSMUST00000183090 32.631±0.00 73.123±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006L7 CIL_0006L7_0002 CGP 7:55931287-56019954
CIL_000391 CIL_000391_0002 CGP 7:55977567-56231794

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000230050 RPS12-001 protein_coding Homo_sapiens 0 545
ENST00000407698 RP11-812I20.2-001 processed_pseudogene Homo_sapiens 0 318
ENST00000414823 AC009413.2-001 processed_pseudogene Homo_sapiens 0 501
ENST00000415024 RP11-313E4.1-001 processed_pseudogene Homo_sapiens 0 309
ENST00000419579 RPS12P23-001 processed_pseudogene Homo_sapiens 0 483
ENST00000428553 RP11-864N7.2-001 processed_pseudogene Homo_sapiens 0 545
ENST00000440335 RP11-613F7.1-001 processed_pseudogene Homo_sapiens 0 494
ENST00000442381 RPS12P18-001 processed_pseudogene Homo_sapiens 0 307
ENST00000461060 RP11-621K7.1-001 processed_pseudogene Homo_sapiens 0 470
ENST00000463278 CTC-398G3.2-001 processed_pseudogene Homo_sapiens 0 514
ENST00000464109 RPS12P20-001 processed_pseudogene Homo_sapiens 5.99994e-41 171
ENST00000484182 RP11-538P18.1-001 processed_pseudogene Homo_sapiens 0 224
ENST00000484616 RPS12-002 retained_intron Homo_sapiens 0 200
ENST00000492017 RPS12P26-001 transcribed_processed_pseudogene Homo_sapiens 0 457
ENST00000616756 RP11-174N3.4-001 processed_pseudogene Homo_sapiens 0 226

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