C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 82
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183190 Zfp82-002 ENSMUSG00000098022 10090 - 7:30059241-30072819 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartLungOvaryENSMUST00000183190
Transcript ID Adipose Adrenal Breast Heart Lung Ovary
ENSMUST00000183190 0.150±0.00 0.255±0.00 0.230±0.04 0.081±0.02 0.437±0.00 0.231±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000763 CIL_000763_0002 CGP 7:30038053-30072900
CIL_0006DS CIL_0006DS_0002 CGP 7:30054489-30090410

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316433 ZNF540-002 protein_coding Homo_sapiens 2e-34 152
ENST00000343599 ZNF540-004 protein_coding Homo_sapiens 2e-34 152
ENST00000376401 CTD-2514C3.1-001 unprocessed_pseudogene Homo_sapiens 6e-21 104
ENST00000510553 RP13-401N8.3-001 unprocessed_pseudogene Homo_sapiens 4e-21 104
ENST00000547456 RP11-125N22.2-001 unprocessed_pseudogene Homo_sapiens 0.000000000000009 84
ENST00000586134 ZNF540-003 protein_coding Homo_sapiens 1e-34 152
ENST00000587220 ZNF540-007 processed_transcript Homo_sapiens 3e-35 152
ENST00000589390 ZNF850-002 protein_coding Homo_sapiens 9e-31 137
ENST00000589857 ZNF540-006 processed_transcript Homo_sapiens 0.000000000002 77
ENST00000590588 ZNF540-008 protein_coding Homo_sapiens 6e-33 145
ENST00000591344 ZNF850-001 protein_coding Homo_sapiens 1e-29 137
ENST00000592533 ZNF540-009 protein_coding Homo_sapiens 2e-34 152
ENST00000610388 RP11-374M1.9-001 unprocessed_pseudogene Homo_sapiens 7e-28 126

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