C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 7985
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183329 Gm7985-001 ENSMUSG00000098224 10090 - 12:71846311-71847291 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000183329
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000183329 0.473±0.08 0.176±0.07 1.458±1.17 0.513±0.23 0.495±0.29 0.423±0.23 0.762±0.19 0.389±0.17 0.556±0.59 0.446±0.16 0.063±0.00 0.396±0.30 0.568±0.07 0.584±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001K5 CIL_0001K5_0002 CGP 12:71309884-71992367
CIL_0001K2 CIL_0001K2_0002 CGP 12:71831078-72070991

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 320
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1002
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 802
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 994
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1002
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1002
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 531
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 787
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 739
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 856
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 540
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 725
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 704
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 913
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 795
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 749
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 758
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 676
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 531
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 562
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 536
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 9e-34 145
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 931
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 702
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 532
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 802
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 802
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 510
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 723
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 750
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 717
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 813
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 582
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 278
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 257
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 688
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 821
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 782
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 680
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 545
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 922

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