C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 17828
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183380 Gm17828-001 ENSMUSG00000098893 10090 - 9:72292542-72293340 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000183380
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000183380 0.496±0.35 0.185±0.14 0.162±0.08 1.199±0.30 0.282±0.11 0.203±0.13 0.230±0.09 0.177±0.07 0.270±0.12 0.394±0.11 0.040±0.00 0.556±0.49 0.402±0.02 0.150±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004OY CIL_0004OY_0002 CGP 9:71842688-72363777

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315731 RPL7A-005 protein_coding Homo_sapiens 0 219
ENST00000323345 RPL7A-009 protein_coding Homo_sapiens 0 926
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 680
ENST00000396414 RP11-242C24.2-001 processed_pseudogene Homo_sapiens 0 634
ENST00000401715 RP3-486D24.1-001 processed_pseudogene Homo_sapiens 0 749
ENST00000417617 AC004129.9-001 processed_pseudogene Homo_sapiens 0 638
ENST00000418052 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 769
ENST00000423357 RPL7AP25-001 processed_pseudogene Homo_sapiens 0 510
ENST00000424041 RPL7AP14-001 processed_pseudogene Homo_sapiens 0 754
ENST00000426573 RP4-738P11.4-001 processed_pseudogene Homo_sapiens 0 479
ENST00000426651 RPL7A-004 protein_coding Homo_sapiens 0 577
ENST00000427056 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 774
ENST00000428027 RP11-534L20.4-001 processed_pseudogene Homo_sapiens 0 780
ENST00000429766 AC073900.4-001 processed_pseudogene Homo_sapiens 0 571
ENST00000430506 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 769
ENST00000430732 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 769
ENST00000434317 RP11-577H5.1-001 processed_pseudogene Homo_sapiens 0 697
ENST00000437448 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 769
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 654
ENST00000445592 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 769
ENST00000449688 RP4-738P11.3-001 processed_pseudogene Homo_sapiens 0 405
ENST00000451600 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 769
ENST00000452821 RP11-170M17.2-001 processed_pseudogene Homo_sapiens 0 793
ENST00000453064 RP11-467H10.1-001 processed_pseudogene Homo_sapiens 0 691
ENST00000453429 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 769
ENST00000463740 RPL7A-001 processed_transcript Homo_sapiens 0 580
ENST00000468019 RPL7A-003 processed_transcript Homo_sapiens 0 924
ENST00000469026 RPL7AP60-001 processed_pseudogene Homo_sapiens 0 793
ENST00000473054 RP11-204K16.1-001 processed_pseudogene Homo_sapiens 0 721
ENST00000473913 RP11-463O9.1-001 processed_pseudogene Homo_sapiens 0 776
ENST00000476420 RPL7AP56-001 processed_pseudogene Homo_sapiens 0 412
ENST00000477943 RPL7AP6-001 processed_pseudogene Homo_sapiens 0 893
ENST00000482859 RPL7AP30-001 processed_pseudogene Homo_sapiens 0 845
ENST00000483820 RPL7AP4-001 processed_pseudogene Homo_sapiens 0 621
ENST00000485706 RPL7A-006 processed_transcript Homo_sapiens 0 486
ENST00000486157 RP11-342F17.2-001 processed_pseudogene Homo_sapiens 0 675
ENST00000486538 RPL7AP11-001 processed_pseudogene Homo_sapiens 0 808
ENST00000488538 RPL7AP26-001 processed_pseudogene Homo_sapiens 0 725
ENST00000496515 RPL7AP2-001 processed_pseudogene Homo_sapiens 0 540
ENST00000496554 RPL7A-002 processed_transcript Homo_sapiens 0 669
ENST00000496790 FAM185A-005 processed_transcript Homo_sapiens 0 241
ENST00000497325 CTD-2270N23.1-001 processed_pseudogene Homo_sapiens 0 828
ENST00000525465 RP11-58K22.2-001 processed_pseudogene Homo_sapiens 0 638
ENST00000541658 RPL7AP3-001 processed_pseudogene Homo_sapiens 0 481
ENST00000557949 RP11-356M20.1-001 processed_pseudogene Homo_sapiens 0 586
ENST00000588490 RPL7AP66-001 processed_pseudogene Homo_sapiens 0 893

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