C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dual specificity phosphatase 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183893 Dusp13-010 ENSMUSG00000021768 10090 - 14:21733589-21748620 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLungOvaryPlacentaENSMUST00000183893
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Lung Ovary Placenta
ENSMUST00000183893 0.076±0.03 0.177±0.00 0.012±0.00 0.074±0.00 0.109±0.02 0.150±0.05 0.073±0.00 0.336±0.00 0.559±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00082Q CIL_00082Q_0002 VISTA 14:21162242-21763695
CIL_0007JX CIL_0007JX_0002 UCNEbase 14:21252402-23394598
CIL_0008UO CIL_0008UO_0002 VISTA 14:21553194-22153685
CIL_000925 CIL_000925_0002 VISTA 14:21565849-22167377
CIL_00084B CIL_00084B_0002 VISTA 14:21666827-22268239
CIL_0006DL CIL_0006DL_0003 CGP 14:21676582-21751181
CIL_0008K8 CIL_0008K8_0002 VISTA 14:21690858-22291990
CIL_0007IJ CIL_0007IJ_0002 CGP 14:21733394-21798725

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006470 IBA protein dephosphorylation
GO:0008138 IDA protein tyrosine/serine/threonine phosphatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308475 DUSP13-001 nonsense_mediated_decay Homo_sapiens 0 708
ENST00000372700 DUSP13-011 protein_coding Homo_sapiens 0 652
ENST00000372702 DUSP13-012 protein_coding Homo_sapiens 0 760
ENST00000394707 DUSP13-006 nonsense_mediated_decay Homo_sapiens 0 900
ENST00000472493 DUSP13-004 protein_coding Homo_sapiens 0 654
ENST00000478873 DUSP13-009 protein_coding Homo_sapiens 0 652
ENST00000479884 DUSP13-010 nonsense_mediated_decay Homo_sapiens 0 760
ENST00000491677 DUSP13-201 protein_coding Homo_sapiens 0 760
ENST00000494588 DUSP13-005 nonsense_mediated_decay Homo_sapiens 0 760
ENST00000605915 DUSP13-002 protein_coding Homo_sapiens 0 652
ENST00000607131 DUSP13-202 protein_coding Homo_sapiens 0 708

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