C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L15, pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184247 Rpl15-ps2-001 ENSMUSG00000098915 10090 + 9:72060937-72061549 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000184247
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000184247 1.955±2.09 1.253±0.25 0.745±0.04 0.990±0.00 0.712±0.51 4.597±3.95 0.910±0.87 0.526±0.17 0.464±0.10 2.596±0.87 0.618±0.43 4.791±7.20 0.626±0.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004OZ CIL_0004OZ_0002 CGP 9:71626509-72111871
CIL_0007TG CIL_0007TG_0002 VISTA 9:71674986-72275900
CIL_0008VA CIL_0008VA_0002 VISTA 9:71675967-72276730
CIL_0004OY CIL_0004OY_0002 CGP 9:71842688-72363777

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307839 RPL15-001 protein_coding Homo_sapiens 0 878
ENST00000354811 RPL15-007 protein_coding Homo_sapiens 0 878
ENST00000391491 RPL15P3-001 processed_pseudogene Homo_sapiens 0 861
ENST00000412097 RPL15-011 protein_coding Homo_sapiens 0 723
ENST00000413699 RPL15-002 protein_coding Homo_sapiens 0 878
ENST00000414329 RP11-106M7.4-001 processed_pseudogene Homo_sapiens 0 675
ENST00000415719 RPL15-013 protein_coding Homo_sapiens 0 878
ENST00000416278 RP11-570G20.1-001 processed_pseudogene Homo_sapiens 0 649
ENST00000416625 RPL15P4-001 processed_pseudogene Homo_sapiens 0 431
ENST00000417590 RPL15P4-001 processed_pseudogene Homo_sapiens 0 431
ENST00000419391 RPL15P4-001 processed_pseudogene Homo_sapiens 0 425
ENST00000422218 RPL15-009 protein_coding Homo_sapiens 0 536
ENST00000422915 RP1-40G4P.1-001 processed_pseudogene Homo_sapiens 0 518
ENST00000429515 AC097523.1-001 processed_pseudogene Homo_sapiens 0 610
ENST00000432924 RPL15P18-001 processed_pseudogene Homo_sapiens 0 749
ENST00000434031 RPL15-014 protein_coding Homo_sapiens 0 736
ENST00000435882 RPL15-005 protein_coding Homo_sapiens 0 878
ENST00000436146 RPL15-008 nonsense_mediated_decay Homo_sapiens 0 826
ENST00000439829 AP002381.2-001 processed_pseudogene Homo_sapiens 0 645
ENST00000439981 RPL15P1-001 processed_pseudogene Homo_sapiens 0 531
ENST00000445480 RPL15P4-001 processed_pseudogene Homo_sapiens 0 431
ENST00000450413 RPL15P4-001 processed_pseudogene Homo_sapiens 0 431
ENST00000451666 RPL15P4-001 processed_pseudogene Homo_sapiens 0 431
ENST00000455192 AC092569.2-001 processed_pseudogene Homo_sapiens 0 241
ENST00000456043 RPL15P4-001 processed_pseudogene Homo_sapiens 0 425
ENST00000456530 RPL15-201 protein_coding Homo_sapiens 0 468
ENST00000457032 RPL15P4-001 processed_pseudogene Homo_sapiens 0 425
ENST00000465786 RPL15-006 retained_intron Homo_sapiens 0 470
ENST00000475247 RP11-214O14.1-001 processed_pseudogene Homo_sapiens 0 588
ENST00000475768 AP000797.1-001 processed_pseudogene Homo_sapiens 0 592
ENST00000477936 RP11-113C12.2-001 processed_pseudogene Homo_sapiens 0 706
ENST00000482912 RPL15P20-001 processed_pseudogene Homo_sapiens 0 614
ENST00000486836 RP11-113A11.1-001 processed_pseudogene Homo_sapiens 0 643
ENST00000487352 RP11-100N21.1-001 processed_pseudogene Homo_sapiens 0 822
ENST00000490223 RPL15-004 retained_intron Homo_sapiens 0 645
ENST00000490252 RPL15P2-001 processed_pseudogene Homo_sapiens 0 695
ENST00000560630 RP11-325E5.4-001 processed_pseudogene Homo_sapiens 0 416
ENST00000567709 RP11-151H2.3-001 processed_pseudogene Homo_sapiens 0 407
ENST00000611050 RPL15-202 protein_coding Homo_sapiens 0 878

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