C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12117
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184486 Gm12117-001 ENSMUSG00000098456 10090 - 11:33275758-33276737 translated_processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverOvaryPlacentaTestisENSMUST00000184486
Transcript ID Bladder Brain Liver Ovary Placenta Testis
ENSMUST00000184486 0.028±0.00 0.062±0.02 0.016±0.01 0.046±0.01 0.072±0.03 0.061±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00092S CIL_00092S_0002 VISTA 11:32891798-33493112
CIL_00097F CIL_00097F_0002 VISTA 11:32999598-33601607
CIL_00088M CIL_00088M_0002 VISTA 11:33042866-33643782
CIL_000977 CIL_000977_0002 VISTA 11:33092412-33693558
CIL_00098H CIL_00098H_0002 VISTA 11:33099828-33701076
CIL_0008SG CIL_0008SG_0002 VISTA 11:33129906-33731024
CIL_0007NP CIL_0007NP_0002 UCNEbase 11:33192157-33430428

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 787
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 686
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 761
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 787
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 787
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 315
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 610
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 532
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 558
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 198
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 531
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 462
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 641
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 608
ENST00000443168 GAPDHP33-001 processed_pseudogene Homo_sapiens 0 300
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 468
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 368
ENST00000447061 GAPDHP25-001 processed_pseudogene Homo_sapiens 0 599
ENST00000449411 GAPDHP74-001 processed_pseudogene Homo_sapiens 0 278
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 752
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 283
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 568
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 568
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 695
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 597
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 586
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 610
ENST00000515281 GAPDHP70-001 processed_pseudogene Homo_sapiens 0 462
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 599
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 510
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 510
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 364
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 682

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