C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tachykinin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184986 Tac1-002 ENSMUSG00000061762 10090 + 6:7555096-7562700 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonLiverLungOvaryPlacentaENSMUST00000184986
Transcript ID Bladder Brain Breast Colon Liver Lung Ovary Placenta
ENSMUST00000184986 0.052±0.00 30.950±36.43 0.217±0.00 2.241±0.00 0.043±0.00 0.116±0.00 1.036±0.58 0.059±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BH CIL_0003BH_0003 CGP 6:6956004-7565834
CIL_0005L4 CIL_0005L4_0003 CGP 6:7554879-7693254

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005576 IDA extracellular region
GO:0006954 IDA inflammatory response
GO:0007217 IEA tachykinin receptor signaling pathway
GO:0007218 IEA neuropeptide signaling pathway
GO:0007268 IEA synaptic transmission
GO:0019233 IMP sensory perception of pain
GO:0030424 IDA axon
GO:0043025 IDA neuronal cell body
GO:0048265 IMP response to pain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319273 TAC1-001 protein_coding Homo_sapiens 0 326
ENST00000346867 TAC1-002 protein_coding Homo_sapiens 0 625
ENST00000350485 TAC1-003 protein_coding Homo_sapiens 0 394
ENST00000491437 TAC1-005 retained_intron Homo_sapiens 0 281

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