C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: golgi autoantigen, golgin subfamily a, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184996 Golga1-002 ENSMUSG00000026754 10090 - 2:39017653-39065488 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000184996
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000184996 7.454±0.00 14.632±0.00 13.086±0.44 18.907±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002C7 CIL_0002C7_0003 CGP 2:39008076-39065541
CIL_00075F CIL_00075F_0002 CGP 2:39016261-39190730

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000042 IEA protein targeting to Golgi
GO:0005515 IPI protein binding
GO:0005794 IDA Golgi apparatus
GO:0005802 IDA trans-Golgi network
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373555 GOLGA1-001 protein_coding Homo_sapiens 0 1666
ENST00000421514 GOLGA1-005 protein_coding Homo_sapiens 0 536
ENST00000475407 GOLGA1-003 nonsense_mediated_decay Homo_sapiens 0 599
ENST00000485337 GOLGA1-002 nonsense_mediated_decay Homo_sapiens 0 353

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