C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RIKEN cDNA 1700088E04 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000185944 1700088E04Rik-007 ENSMUSG00000033029 10090 - 15:79129349-79134916 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaTestisENSMUST00000185944
Transcript ID Brain Placenta Testis
ENSMUST00000185944 4.422±0.00 6.321±0.76 15.538±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099H CIL_00099H_0002 VISTA 15:78863840-79464236
CIL_0008KJ CIL_0008KJ_0002 VISTA 15:78865517-79466323
CIL_0008BX CIL_0008BX_0002 VISTA 15:78873761-79474273
CIL_0008KA CIL_0008KA_0002 VISTA 15:78875821-79476550
CIL_00082J CIL_00082J_0002 VISTA 15:78908803-79509777
CIL_0008C1 CIL_0008C1_0002 VISTA 15:78918952-79520098
CIL_00082K CIL_00082K_0002 VISTA 15:78923635-79524085
CIL_0008MM CIL_0008MM_0002 VISTA 15:79023554-79624112
CIL_0003QI CIL_0003QI_0002 CGP 15:79075223-79136897
CIL_0006F9 CIL_0006F9_0003 CGP 15:79108972-79141253
CIL_0003QJ CIL_0003QJ_0002 CGP 15:79129349-79151774

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000215957 MICALL1-001 protein_coding Homo_sapiens 4e-38 165
ENST00000402631 MICALL1-004 processed_transcript Homo_sapiens 2e-38 165
ENST00000454685 MICALL1-006 protein_coding Homo_sapiens 2e-39 167

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