C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 3508
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000186012 RP24-117M7.2-001 ENSMUSG00000100767 10090 - 1:119241962-119242753 processed_pseudogene

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081M CIL_00081M_0003 VISTA 1:118688411-119294612

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274065 RPS3A-001 protein_coding Homo_sapiens 0 405
ENST00000389400 RPS3AP5-001 processed_pseudogene Homo_sapiens 0 348
ENST00000398190 RP11-7D5.2-001 processed_pseudogene Homo_sapiens 0 329
ENST00000419176 RP11-119F7.3-001 processed_pseudogene Homo_sapiens 0 254
ENST00000425466 RPS3AP44-001 processed_pseudogene Homo_sapiens 0 305
ENST00000426743 RP11-163G10.2-001 processed_pseudogene Homo_sapiens 2.00386e-43 180
ENST00000451219 CTA-85E5.6-001 processed_pseudogene Homo_sapiens 0 300
ENST00000471604 RPS3AP42-001 processed_pseudogene Homo_sapiens 0 252
ENST00000474167 CTC-451P13.1-001 processed_pseudogene Homo_sapiens 0 385
ENST00000488297 RPS3AP22-001 processed_pseudogene Homo_sapiens 0 272
ENST00000493479 RP11-555K12.1-001 processed_pseudogene Homo_sapiens 0 470
ENST00000506126 RPS3A-007 protein_coding Homo_sapiens 0 405
ENST00000507327 RPS3A-011 protein_coding Homo_sapiens 0 313
ENST00000507485 RPS3A-002 retained_intron Homo_sapiens 2e-32 145
ENST00000509736 RPS3A-006 protein_coding Homo_sapiens 0 405
ENST00000510993 RPS3A-010 protein_coding Homo_sapiens 0 344
ENST00000512690 RPS3A-015 protein_coding Homo_sapiens 0 375
ENST00000514682 RPS3A-004 protein_coding Homo_sapiens 0 405
ENST00000515792 RPS3A-012 protein_coding Homo_sapiens 0 405
ENST00000515818 RPS3A-013 nonsense_mediated_decay Homo_sapiens 0 211
ENST00000555161 RPS3AP4-001 processed_pseudogene Homo_sapiens 0 294
ENST00000604922 SH3D19-012 processed_transcript Homo_sapiens 5e-33 145

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