C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 20587
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000186367 RP23-191A12.1-001 ENSMUSG00000099714 10090 + 1:20821331-20822516 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverOvaryPlacentaTestisENSMUST00000186367
Transcript ID Brain Liver Ovary Placenta Testis
ENSMUST00000186367 0.026±0.00 0.005±0.00 0.104±0.10 0.005±0.00 0.075±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081C CIL_00081C_0002 VISTA 1:20619958-21222635
CIL_0002I8 CIL_0002I8_0003 CGP 1:20802968-20939650

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258091 CCT7-001 protein_coding Homo_sapiens 0 769
ENST00000398422 CCT7-010 protein_coding Homo_sapiens 0 466
ENST00000406551 CCT7P1-001 processed_pseudogene Homo_sapiens 0 494
ENST00000409924 CCT7-015 nonsense_mediated_decay Homo_sapiens 0 204
ENST00000469844 CCT7-004 processed_transcript Homo_sapiens 0 217
ENST00000473786 CCT7-013 processed_transcript Homo_sapiens 0 494
ENST00000488856 CCT7-016 retained_intron Homo_sapiens 0 285
ENST00000539919 CCT7-201 protein_coding Homo_sapiens 0 763
ENST00000540468 CCT7-202 protein_coding Homo_sapiens 0 678

Loading