C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol glycan anchor biosynthesis, class N
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000186485 Pign-001 ENSMUSG00000056536 10090 - 1:105518426-105663662 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000186485
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000186485 2.483±0.79 1.869±0.38 3.336±0.71 1.638±0.01 1.536±0.65 2.470±0.70 1.202±0.14 1.989±0.19 2.226±0.85 3.981±0.47 0.540±0.16 3.198±1.81 3.212±1.48 2.419±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007FF CIL_0007FF_0002 CGP 1:105276914-105663677
CIL_00055U CIL_00055U_0002 CGP 1:105518422-105755191

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005789 IEA endoplasmic reticulum membrane
GO:0006506 IEA GPI anchor biosynthetic process
GO:0016020 IEA membrane
GO:0016780 TAS phosphotransferase activity, for other substituted phosphate groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357637 PIGN-001 protein_coding Homo_sapiens 0 3109
ENST00000400334 PIGN-004 protein_coding Homo_sapiens 0 3109
ENST00000585344 PIGN-002 protein_coding Homo_sapiens 0 368
ENST00000585458 PIGN-012 protein_coding Homo_sapiens 0 459
ENST00000585923 PIGN-007 protein_coding Homo_sapiens 0 778
ENST00000585926 PIGN-006 protein_coding Homo_sapiens 0 355
ENST00000587134 PIGN-010 protein_coding Homo_sapiens 3.00004e-41 172
ENST00000587942 PIGN-017 retained_intron Homo_sapiens 0 869
ENST00000588571 PIGN-003 protein_coding Homo_sapiens 0 490
ENST00000588748 PIGN-014 protein_coding Homo_sapiens 0 697
ENST00000589098 PIGN-015 protein_coding Homo_sapiens 0 346
ENST00000589339 PIGN-008 protein_coding Homo_sapiens 0 394
ENST00000589414 PIGN-019 protein_coding Homo_sapiens 0 798
ENST00000589720 PIGN-005 protein_coding Homo_sapiens 0 763
ENST00000590765 PIGN-009 protein_coding Homo_sapiens 0 507
ENST00000591238 PIGN-013 protein_coding Homo_sapiens 0 484
ENST00000592803 PIGN-016 nonsense_mediated_decay Homo_sapiens 0 520

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