C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1810043H04 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000186913 1810043H04Rik-003 ENSMUSG00000078572 10090 + 11:120099099-120100414 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000186913
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000186913 6.997±0.70 8.475±1.25 12.336±0.06 24.261±27.25 5.914±2.91 7.064±0.27 10.919±1.43 11.927±3.32 5.437±1.47 6.302±0.52 9.908±2.49 9.887±5.88 20.703±14.02 30.110±35.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003U4 CIL_0003U4_0003 CGP 11:120090531-120100705
CIL_00043W CIL_00043W_0003 CGP 11:120098928-120151346

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000431388 C17orf89-001 protein_coding Homo_sapiens 2e-38 163
ENST00000573090 C17orf89-005 retained_intron Homo_sapiens 4e-31 139
ENST00000575067 C17orf89-003 processed_transcript Homo_sapiens 0.0000000004 68
ENST00000576002 C17orf89-002 protein_coding Homo_sapiens 2e-20 102
ENST00000577158 C17orf89-007 processed_transcript Homo_sapiens 2e-29 132
ENST00000605837 RP11-396C23.3-001 processed_pseudogene Homo_sapiens 6e-23 110

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