C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TRAF3 interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000187588 Traf3ip1-002 ENSMUSG00000034292 10090 + 1:91518262-91529307 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000187588
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000187588 1.535±0.39 2.419±1.40 3.711±2.42 1.206±0.00 2.113±0.88 2.144±1.16 0.818±0.24 4.283±1.76 0.311±0.05 3.946±1.20 0.643±0.19 5.879±0.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D3 CIL_0008D3_0002 VISTA 1:90908179-91512308
CIL_0003NE CIL_0003NE_0002 CGP 1:91415982-91529307
CIL_0004UF CIL_0004UF_0003 CGP 1:91494647-91559589

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373327 TRAF3IP1-001 protein_coding Homo_sapiens 0 809
ENST00000391993 TRAF3IP1-002 protein_coding Homo_sapiens 0 809
ENST00000462122 TRAF3IP1-004 retained_intron Homo_sapiens 0 647
ENST00000483951 TRAF3IP1-005 retained_intron Homo_sapiens 0 468

Loading