C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin associated protein 5-1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000188274 Krtap5-1-001 ENSMUSG00000066100 10090 - 7:142296377-142297118 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLiverPlacentaENSMUST00000188274
Transcript ID Brain Colon Liver Placenta
ENSMUST00000188274 0.016±0.00 0.083±0.03 0.010±0.00 0.045±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MR CIL_0008MR_0002 VISTA 7:142247512-142849546
CIL_0007RG CIL_0007RG_0002 VISTA 7:142251566-142854813
CIL_00097V CIL_00097V_0002 VISTA 7:142268912-142873912

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0045095 IEA keratin filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000382160 KRTAP5-6-001 protein_coding Homo_sapiens 0.0000000003 69
ENST00000398531 KRTAP5-10-001 protein_coding Homo_sapiens 7e-35 152
ENST00000398534 KRTAP5-8-001 protein_coding Homo_sapiens 1.00053e-42 178
ENST00000399676 KRTAP5-5-001 protein_coding Homo_sapiens 0.000001 58
ENST00000399682 KRTAP5-4-001 protein_coding Homo_sapiens 1e-37 161
ENST00000399685 KRTAP5-3-001 protein_coding Homo_sapiens 2e-29 134
ENST00000502328 KRTAP5-14P-001 processed_pseudogene Homo_sapiens 1e-23 111
ENST00000511464 AP000867.14-001 processed_pseudogene Homo_sapiens 2e-33 145
ENST00000528743 KRTAP5-9-001 protein_coding Homo_sapiens 2e-36 158
ENST00000610555 KRTAP5-8-201 protein_coding Homo_sapiens 3e-37 159
ENST00000611731 KRTAP5-6-201 protein_coding Homo_sapiens 0.0000000003 69
ENST00000613035 AC130310.2-201 protein_coding Homo_sapiens 0.0000008 58
ENST00000615268 AC130310.3-202 protein_coding Homo_sapiens 4.06377e-44 182
ENST00000616336 AC130310.3-201 protein_coding Homo_sapiens 3e-40 169
ENST00000617152 KRTAP5-11-202 protein_coding Homo_sapiens 9e-36 154
ENST00000618541 KRTAP5-5-201 protein_coding Homo_sapiens 0.000002 58
ENST00000619191 KRTAP5-10-202 protein_coding Homo_sapiens 0 200
ENST00000620564 KRTAP5-3-201 protein_coding Homo_sapiens 2e-29 134

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