Genome
Exciting message
Genes
Connecting
Transcripts
Connecting
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | potassium large conductance calcium-activated channel, subfamily M, alpha member 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000188285  |
Kcnma1-003 |
ENSMUSG00000063142 |
10090 | - |
14:23299381-24004205  |
protein_coding |
|
Genome Exciting message Genes Connecting Transcripts Connecting Powered by Dalliance 0.11.11 |
||||||
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007JX | CIL_0007JX_0002 | UCNEbase | 14:21252402-23394598 |
| CIL_0005E6 | CIL_0005E6_0002 | CGP | 14:22019712-24004859 |
| CIL_000928 | CIL_000928_0002 | VISTA | 14:22714212-23323263 |
| CIL_0008H2 | CIL_0008H2_0002 | VISTA | 14:22740563-23341478 |
| CIL_0008QZ | CIL_0008QZ_0002 | VISTA | 14:22794627-23395917 |
| CIL_0008KV | CIL_0008KV_0002 | VISTA | 14:23186013-23786602 |
| CIL_0008L3 | CIL_0008L3_0002 | VISTA | 14:23193824-23794811 |
| CIL_00087A | CIL_00087A_0002 | VISTA | 14:23220146-23821598 |
| CIL_0004CA | CIL_0004CA_0002 | CGP | 14:23289431-24245920 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001666 | IEA | response to hypoxia |
| GO:0003779 | IEA | actin binding |
| GO:0005249 | IEA | voltage-gated potassium channel activity |
| GO:0005515 | IEA | protein binding |
| GO:0005901 | IEA | caveola |
| GO:0006970 | IEA | response to osmotic stress |
| GO:0008076 | IEA | voltage-gated potassium channel complex |
| GO:0016324 | IEA | apical plasma membrane |
| GO:0030007 | IEA | cellular potassium ion homeostasis |
| GO:0034465 | IEA | response to carbon monoxide |
| GO:0042391 | IEA | regulation of membrane potential |
| GO:0043065 | IEA | positive regulation of apoptotic process |
| GO:0045794 | IEA | negative regulation of cell volume |
| GO:0051592 | IEA | response to calcium ion |
| GO:0060072 | IEA | large conductance calcium-activated potassium channel activity |
| GO:0060073 | IEA | micturition |
| GO:0060083 | IEA | smooth muscle contraction involved in micturition |
| GO:0070062 | IEA | extracellular vesicular exosome |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000122557
|
kcnma1a-201 | protein_coding | Danio_rerio | 0 | 1500 |
|
ENSDART00000143200
|
kcnma1a-001 | protein_coding | Danio_rerio | 0 | 1500 |
|
ENSDART00000082500
|
kcnma1b-201 | protein_coding | Danio_rerio | 0 | 569 |
|
ENSDART00000113062
|
BICD1 (1 of 2)-201 | protein_coding | Danio_rerio | 0.00005 | 55 |
|
ENST00000286627
|
KCNMA1-001 | protein_coding | Homo_sapiens | 0 | 3280 |
|
ENST00000286628
|
KCNMA1-009 | protein_coding | Homo_sapiens | 0 | 5467 |
|
ENST00000354353
|
KCNMA1-201 | protein_coding | Homo_sapiens | 0 | 2538 |
|
ENST00000372403
|
KCNMA1-004 | protein_coding | Homo_sapiens | 0 | 2942 |
|
ENST00000372408
|
KCNMA1-005 | protein_coding | Homo_sapiens | 0 | 2867 |
|
ENST00000372421
|
KCNMA1-002 | protein_coding | Homo_sapiens | 0 | 3042 |
|
ENST00000372437
|
KCNMA1-006 | protein_coding | Homo_sapiens | 0 | 5616 |
|
ENST00000372440
|
KCNMA1-003 | protein_coding | Homo_sapiens | 0 | 3280 |
|
ENST00000372443
|
KCNMA1-010 | protein_coding | Homo_sapiens | 0 | 3280 |
|
ENST00000404771
|
KCNMA1-008 | protein_coding | Homo_sapiens | 0 | 5587 |
|
ENST00000404857
|
KCNMA1-202 | protein_coding | Homo_sapiens | 0 | 2615 |
|
ENST00000406533
|
KCNMA1-203 | protein_coding | Homo_sapiens | 0 | 2538 |
|
ENST00000428546
|
KCNMA1-019 | protein_coding | Homo_sapiens | 0 | 669 |
|
ENST00000434208
|
KCNMA1-011 | protein_coding | Homo_sapiens | 0 | 2008 |
|
ENST00000450795
|
KCNMA1-018 | protein_coding | Homo_sapiens | 0 | 813 |
|
ENST00000457953
|
KCNMA1-007 | protein_coding | Homo_sapiens | 0 | 5821 |
|
ENST00000475352
|
KCNMA1-012 | processed_transcript | Homo_sapiens | 0 | 219 |
|
ENST00000480683
|
KCNMA1-015 | protein_coding | Homo_sapiens | 0 | 749 |
|
ENST00000481070
|
KCNMA1-014 | protein_coding | Homo_sapiens | 0 | 749 |
|
ENST00000484343
|
KCNMA1-017 | processed_transcript | Homo_sapiens | 0 | 302 |
|
ENST00000484507
|
KCNMA1-016 | processed_transcript | Homo_sapiens | 0 | 418 |
|
ENST00000604624
|
KCNMA1-020 | protein_coding | Homo_sapiens | 0 | 2865 |
|
ENST00000618048
|
KCNMA1-204 | protein_coding | Homo_sapiens | 0 | 749 |
