C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TRAF3 interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189341 Traf3ip1-003 ENSMUSG00000034292 10090 + 1:91494647-91527956 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000189341
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000189341 0.973±0.03 1.119±0.26 0.886±0.00 3.231±0.00 1.132±0.29 1.036±0.00 2.239±0.00 0.887±0.41 0.669±0.00 4.415±1.91 1.000±0.71 30.778±40.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D3 CIL_0008D3_0002 VISTA 1:90908179-91512308
CIL_0003NE CIL_0003NE_0002 CGP 1:91415982-91529307
CIL_0004UF CIL_0004UF_0003 CGP 1:91494647-91559589

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373327 TRAF3IP1-001 protein_coding Homo_sapiens 0 837
ENST00000391993 TRAF3IP1-002 protein_coding Homo_sapiens 0 811
ENST00000409739 TRAF3IP1-003 nonsense_mediated_decay Homo_sapiens 5.60519e-45 185
ENST00000462122 TRAF3IP1-004 retained_intron Homo_sapiens 0 645
ENST00000483951 TRAF3IP1-005 retained_intron Homo_sapiens 0 468

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