C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: twinfilin, actin-binding protein, homolog 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189708 Twf2-005 ENSMUSG00000023277 10090 + 9:106214228-106215021 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaENSMUST00000189708
Transcript ID Ovary Placenta
ENSMUST00000189708 10.355±0.00 11.579±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NT CIL_0008NT_0002 VISTA 9:106082995-106685663
CIL_00087C CIL_00087C_0002 VISTA 9:106116951-106718793

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000305533 TWF2-001 protein_coding Homo_sapiens 0 396
ENST00000478201 TLR9-002 nonsense_mediated_decay Homo_sapiens 2e-38 163
ENST00000494383 TLR9-001 protein_coding Homo_sapiens 7.9874e-44 183

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