C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: autophagy related 9A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189820 Atg9a-005 ENSMUSG00000033124 10090 - 1:75180865-75190382 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0002 VISTA 1:75047166-75647630
CIL_0006EA CIL_0006EA_0002 CGP 1:75171717-75192196
CIL_0006EI CIL_0006EI_0002 CGP 1:75180860-75199387

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000125002 atg9a-201 protein_coding Danio_rerio 0 785
ENSDART00000065411 atg9a-001 protein_coding Danio_rerio 0 785
ENSDART00000137122 atg9a-003 protein_coding Danio_rerio 5.99994e-41 174
ENSDART00000132677 atg9a-002 protein_coding Danio_rerio 5.99994e-41 174
ENST00000361242 ATG9A-003 protein_coding Homo_sapiens 0 3415
ENST00000396761 ATG9A-001 protein_coding Homo_sapiens 0 3415
ENST00000409033 ATG9A-002 nonsense_mediated_decay Homo_sapiens 0 1941
ENST00000409422 ATG9A-021 protein_coding Homo_sapiens 0 3306
ENST00000409618 ATG9A-004 protein_coding Homo_sapiens 0 3415
ENST00000412355 ATG9A-011 nonsense_mediated_decay Homo_sapiens 0 630
ENST00000428226 ATG9A-012 protein_coding Homo_sapiens 0 732
ENST00000429920 ATG9A-023 protein_coding Homo_sapiens 0 913
ENST00000431715 ATG9A-010 protein_coding Homo_sapiens 0 697
ENST00000432520 ATG9A-016 protein_coding Homo_sapiens 0 627
ENST00000434939 ATG9A-019 protein_coding Homo_sapiens 0 379
ENST00000436856 ATG9A-013 protein_coding Homo_sapiens 0 793
ENST00000439812 ATG9A-009 protein_coding Homo_sapiens 0 555
ENST00000443140 ATG9A-018 protein_coding Homo_sapiens 0 401
ENST00000446716 ATG9A-006 nonsense_mediated_decay Homo_sapiens 0 928
ENST00000455079 ATG9A-020 nonsense_mediated_decay Homo_sapiens 0 505
ENST00000456708 ATG9A-007 nonsense_mediated_decay Homo_sapiens 0 544
ENST00000457841 ATG9A-008 protein_coding Homo_sapiens 0 739
ENST00000466217 ATG9A-015 retained_intron Homo_sapiens 0 523
ENST00000475339 ATG9A-022 retained_intron Homo_sapiens 0 627
ENST00000486766 ATG9A-014 retained_intron Homo_sapiens 0 405
ENST00000488833 ATG9A-017 processed_transcript Homo_sapiens 1e-38 163
ENST00000601372 ZNF558-001 protein_coding Homo_sapiens 0.0005 53

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