C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kinectin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189986 Ktn1-001 ENSMUSG00000021843 10090 + 14:47649394-47736564 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverOvaryENSMUST00000189986
Transcript ID Liver Ovary
ENSMUST00000189986 1.028±0.14 4.409±0.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000604 CIL_000604_0003 CGP 14:47648448-48260883

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334975 KTN1-009 retained_intron Homo_sapiens 0 547
ENST00000395308 KTN1-005 protein_coding Homo_sapiens 0 2680
ENST00000395309 KTN1-201 protein_coding Homo_sapiens 0 2680
ENST00000395311 KTN1-003 protein_coding Homo_sapiens 0 2680
ENST00000395314 KTN1-002 protein_coding Homo_sapiens 0 2844
ENST00000413890 KTN1-202 protein_coding Homo_sapiens 0 2680
ENST00000438792 KTN1-004 protein_coding Homo_sapiens 0 2844
ENST00000459737 KTN1-001 nonsense_mediated_decay Homo_sapiens 0 2844
ENST00000553360 KTN1-016 nonsense_mediated_decay Homo_sapiens 0 499
ENST00000553624 KTN1-018 protein_coding Homo_sapiens 2e-29 134
ENST00000553710 KTN1-022 nonsense_mediated_decay Homo_sapiens 0 187
ENST00000554306 KTN1-017 retained_intron Homo_sapiens 8.00001e-41 171
ENST00000554507 KTN1-006 protein_coding Homo_sapiens 0 553
ENST00000554567 KTN1-015 protein_coding Homo_sapiens 0 551
ENST00000554570 KTN1-021 protein_coding Homo_sapiens 8.99998e-41 171
ENST00000554890 KTN1-019 protein_coding Homo_sapiens 8e-37 158
ENST00000555172 KTN1-008 retained_intron Homo_sapiens 0 547
ENST00000555498 KTN1-014 protein_coding Homo_sapiens 0 276
ENST00000555573 KTN1-007 protein_coding Homo_sapiens 0 547
ENST00000556631 KTN1-010 retained_intron Homo_sapiens 0 547
ENST00000557267 KTN1-013 protein_coding Homo_sapiens 0 220

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