C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: high density lipoprotein (HDL) binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000190321 Hdlbp-007 ENSMUSG00000034088 10090 - 1:93431018-93445682 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENSMUST00000190321
Transcript ID Ovary Placenta Testis
ENSMUST00000190321 242.921±0.00 447.193±138.34 253.963±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000473 CIL_000473_0002 CGP 1:93373930-93478815
CIL_0002JH CIL_0002JH_0002 CGP 1:93405940-93510260

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310931 HDLBP-003 protein_coding Homo_sapiens 0 496
ENST00000373292 HDLBP-004 protein_coding Homo_sapiens 0 496
ENST00000391975 HDLBP-001 protein_coding Homo_sapiens 0 496
ENST00000391976 HDLBP-002 protein_coding Homo_sapiens 0 496
ENST00000422933 HDLBP-031 protein_coding Homo_sapiens 0 339
ENST00000427183 HDLBP-201 protein_coding Homo_sapiens 0 496
ENST00000428482 HDLBP-015 protein_coding Homo_sapiens 0 327
ENST00000449864 HDLBP-021 protein_coding Homo_sapiens 2e-37 159
ENST00000453141 HDLBP-033 protein_coding Homo_sapiens 0 496
ENST00000470710 HDLBP-034 retained_intron Homo_sapiens 0 346

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